6I9Q image
Deposition Date 2018-11-24
Release Date 2019-04-17
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6I9Q
Title:
Structure of the mouse CD98 heavy chain ectodomain
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 4 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:4F2 cell-surface antigen heavy chain
Gene (Uniprot):Slc3a2
Chain IDs:A
Chain Length:434
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Structural differences between the ectodomains of murine and human CD98hc.
Proteins 87 693 698 (2019)
PMID: 30958588 DOI: 10.1002/prot.25686

Abstact

The CD98 heavy chain (CD98hc) constitutes both a promising cell surface target for the treatment of cancers and a transcytosis receptor potentially useful for the brain delivery of therapeutics. However, pharmacokinetic studies and safety assessment of cognate antibodies or nonimmunoglobulin binding proteins in rodents is hampered by cross-species variability of both amino acid sequence and glycosylation pattern. Here, we report the crystal structure of the murine CD98hc extracellular domain and a comprehensive comparison with its human ortholog, revealing only one conserved surface patch that is neither shielded by glycosylation nor by the cell membrane with an accessible surface area typical for an antibody epitope. Our results imply the necessity of a surrogate approach for CD98hc-specific binding proteins with predictive power for clinical investigations.

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Primary Citation of related structures