6I7H image
Deposition Date 2018-11-16
Release Date 2019-09-25
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6I7H
Keywords:
Title:
Crystal structure of dimeric FICD mutant K256S
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Adenosine monophosphate-protein transferase FICD
Gene (Uniprot):FICD
Mutations:K256S
Chain IDs:A
Chain Length:343
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
An oligomeric state-dependent switch in the ER enzyme FICD regulates AMPylation and deAMPylation of BiP.
Embo J. 38 e102177 e102177 (2019)
PMID: 31531998 DOI: 10.15252/embj.2019102177

Abstact

AMPylation is an inactivating modification that alters the activity of the major endoplasmic reticulum (ER) chaperone BiP to match the burden of unfolded proteins. A single ER-localised Fic protein, FICD (HYPE), catalyses both AMPylation and deAMPylation of BiP. However, the basis for the switch in FICD's activity is unknown. We report on the transition of FICD from a dimeric enzyme, that deAMPylates BiP, to a monomer with potent AMPylation activity. Mutations in the dimer interface, or of residues along an inhibitory pathway linking the dimer interface to the enzyme's active site, favour BiP AMPylation in vitro and in cells. Mechanistically, monomerisation relieves a repressive effect allosterically propagated from the dimer interface to the inhibitory Glu234, thereby permitting AMPylation-competent binding of MgATP. Moreover, a reciprocal signal, propagated from the nucleotide-binding site, provides a mechanism for coupling the oligomeric state and enzymatic activity of FICD to the energy status of the ER.

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Primary Citation of related structures