6I28 image
Deposition Date 2018-10-31
Release Date 2019-02-20
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6I28
Keywords:
Title:
Crystal Structure of Cydia Pomonella PTP-2 phosphatase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ORF98 PTP-2
Gene (Uniprot):orf98 ptp-2
Chain IDs:A
Chain Length:168
Number of Molecules:1
Biological Source:Cydia pomonella granulosis virus
Primary Citation
Crystal structure of protein tyrosine phosphatase-2 from Cydia pomonella granulovirus.
Acta Crystallogr.,Sect.F 75 233 238 (2019)
PMID: 30950823 DOI: 10.1107/S2053230X19002322

Abstact

Many viral genomes encode kinase and phosphatase enzymes to manipulate pathways that are controlled by phosphorylation events. The majority of viral phosphatase genes occur in the Baculoviridae and Poxviridae families of large DNA viruses. The corresponding protein sequences belong to four major homology groups, and structures are currently available for only two of these. Here, the first structure from the third group, the protein tyrosine phosphatase-2 (PTP-2) class of viral phosphatases, is described. It is shown that Cydia pomonella granulovirus PTP-2 has the same general fold and active-site architecture as described previously for other phosphatases, in the absence of significant sequence homology. Additionally, it has a novel C-terminal extension in an area corresponding to the interface of dimeric poxvirus phosphatases belonging to the Tyr-Ser protein phosphatase homology group.

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Primary Citation of related structures