6HVJ image
Entry Detail
PDB ID:
6HVJ
Keywords:
Title:
Human PFKFB3 in complex with a N-Aryl 6-Aminoquinoxaline inhibitor 3
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-10-11
Release Date:
2018-11-14
Method Details:
Experimental Method:
Resolution:
2.28 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3
Chain IDs:A
Chain Length:520
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation

Abstact

Energy and biomass production in cancer cells are largely supported by aerobic glycolysis in what is called the Warburg effect. The process is regulated by key enzymes, among which phosphofructokinase PFK-2 plays a significant role by producing fructose-2,6-biphosphate; the most potent activator of the glycolysis rate-limiting step performed by phosphofructokinase PFK-1. Herein, the synthesis, biological evaluation and structure-activity relationship of novel inhibitors of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (PFKFB3), which is the ubiquitous and hypoxia-induced isoform of PFK-2, are reported. X-ray crystallography and docking were instrumental in the design and optimisation of a series of N-aryl 6-aminoquinoxalines. The most potent representative, N-(4-methanesulfonylpyridin-3-yl)-8-(3-methyl-1-benzothiophen-5-yl)quinoxalin-6-amine, displayed an IC50 of 14 nm for the target and an IC50 of 0.49 μm for fructose-2,6-biphosphate production in human colon carcinoma HCT116 cells. This work provides a new entry in the field of PFKFB3 inhibitors with potential for development in oncology.

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Primary Citation of related structures