6HRN image
Entry Detail
PDB ID:
6HRN
Keywords:
Title:
C-Phycocyanin from heterocyst forming filamentous cyanobacterium Nostoc sp. WR13
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2018-09-27
Release Date:
2019-06-05
Method Details:
Experimental Method:
Resolution:
1.51 Å
R-Value Free:
0.15
R-Value Work:
0.11
R-Value Observed:
0.11
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha Subunit of Cyanobacterial Phycocyanin protein
Chain IDs:A
Chain Length:162
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Description:Beta Subunit of Cyanobacterial Phycocyanin protein
Chain IDs:B
Chain Length:172
Number of Molecules:1
Biological Source:Nostoc sp.
Primary Citation
Crystal structure of phycocyanin from heterocyst-forming filamentous cyanobacterium Nostoc sp. WR13.
Int.J.Biol.Macromol. 135 62 68 (2019)
PMID: 31121226 DOI: 10.1016/j.ijbiomac.2019.05.099

Abstact

Phycocyanin (PC) is the principal pigment protein in the light-harvesting antenna of cyanobacteria. Here the biochemical characterization and the 1.51 Å crystal structure of PC from cyanobacterium Nostoc sp. WR13 (Nst-PC) is reported. The P63 crystal lattice is composed of the minimal biological entities of Nst-PC, the (αβ)3 trimeric rings. The structure has been refined to R factor 11.5% (Rfree 15.4%) using anisotropic atomic B factors. A phylogenetic study shows that the α and β chains of Nst-PC are significantly clustered in a distinct clade with Acaryochloris marina. The structure was examined to look for any significant differences between Nst-PC and PC from non-desert species. Only minor differences were found in the chromophore microenvironments. The tentative energy transfer pathways in Nst-PC were modeled based on simple structural considerations.

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