6HQZ image
Deposition Date 2018-09-25
Release Date 2019-04-10
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6HQZ
Keywords:
Title:
Crystal structure of the type III effector protein AvrRpt2 from Erwinia amylovora, a C70 family cysteine protease
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AvrRpt2
Chain IDs:A, B
Chain Length:154
Number of Molecules:2
Biological Source:Erwinia amylovora
Primary Citation
The structure of Erwinia amylovora AvrRpt2 provides insight into protein maturation and induced resistance to fire blight by Malus × robusta 5.
J.Struct.Biol. 206 233 242 (2019)
PMID: 30928616 DOI: 10.1016/j.jsb.2019.03.010

Abstact

The AvrRpt2 protein of the phytopathogenic bacterium Erwinia amylovora (AvrRpt2EA) is a secreted type III effector protein, which is recognised by the FB_MR5 resistance protein of Malus × robusta 5, the only identified resistance protein from a Malus species preventing E. amylovora infection. The crystal structure of the immature catalytic domain of AvrRpt2EA, a C70 family cysteine protease and type III effector, was determined to a resolution of 1.85 Å. The structure provides insights into the cyclophilin-dependent activation of AvrRpt2, and identifies a cryptic leucine of a non-canonical cyclophilin binding motif. The structure also suggests that residue Cys156, responsible for the gene induced resistance, is not involved in substrate determination, and hints that recognition by FB_MR5 is due to direct interaction.

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Primary Citation of related structures
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