6HOY image
Deposition Date 2018-09-18
Release Date 2018-11-14
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6HOY
Keywords:
Title:
Human Sirt6 in complex with ADP-ribose and the inhibitor trichostatin A
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 63
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:NAD-dependent protein deacetylase sirtuin-6
Gene (Uniprot):SIRT6
Chain IDs:A, B
Chain Length:302
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural Basis of Sirtuin 6 Inhibition by the Hydroxamate Trichostatin A: Implications for Protein Deacylase Drug Development.
J.Med.Chem. 61 10922 10928 (2018)
PMID: 30395713 DOI: 10.1021/acs.jmedchem.8b01455

Abstact

Protein lysine deacylases comprise three zinc-dependent families and the NAD+-dependent sirtuins Sirt1-7, which contribute to aging-related diseases. Few Sirt6-specific inhibitors are available. Trichostatin A, which belongs to the potent, zinc-chelating hydroxamate inhibitors of zinc-dependent deacylases, was recently found to potently and isoform-specifically inhibit Sirt6. We solved a crystal structure of a Sirt6/ADP-ribose/trichostatin A complex, which reveals nicotinamide pocket and acyl channel as binding site and provides interaction details supporting the development of improved deacylase inhibitors.

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Chemical

Disease

Primary Citation of related structures
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