6HKN image
Entry Detail
PDB ID:
6HKN
Keywords:
Title:
Crystal structure of Compound 35 with ERK5
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-09-07
Release Date:
2019-02-27
Method Details:
Experimental Method:
Resolution:
2.33 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Mitogen-activated protein kinase 7
Chain IDs:A
Chain Length:340
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Discovery and Characterization of the Potent and Highly Selective (Piperidin-4-yl)pyrido[3,2- d]pyrimidine Based in Vitro Probe BAY-885 for the Kinase ERK5.
J. Med. Chem. 62 928 940 (2019)
PMID: 30563338 DOI: 10.1021/acs.jmedchem.8b01606

Abstact

The availability of a chemical probe to study the role of a specific domain of a protein in a concentration- and time-dependent manner is of high value. Herein, we report the identification of a highly potent and selective ERK5 inhibitor BAY-885 by high-throughput screening and subsequent structure-based optimization. ERK5 is a key integrator of cellular signal transduction, and it has been shown to play a role in various cellular processes such as proliferation, differentiation, apoptosis, and cell survival. We could demonstrate that inhibition of ERK5 kinase and transcriptional activity with a small molecule did not translate into antiproliferative activity in different relevant cell models, which is in contrast to the results obtained by RNAi technology.

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