6HEQ image
Entry Detail
PDB ID:
6HEQ
Keywords:
Title:
Prion nanobody 484
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-08-20
Release Date:
2019-12-04
Method Details:
Experimental Method:
Resolution:
1.23 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Prion nanobody 484
Chain IDs:A
Chain Length:122
Number of Molecules:1
Biological Source:Camelus dromedarius
Primary Citation
Structural evidence for the critical role of the prion protein hydrophobic region in forming an infectious prion.
Plos Pathog. 15 e1008139 e1008139 (2019)
PMID: 31815959 DOI: 10.1371/journal.ppat.1008139

Abstact

Prion or PrPSc is the proteinaceous infectious agent causing prion diseases in various mammalian species. Despite decades of research, the structural basis for PrPSc formation and prion infectivity remains elusive. To understand the role of the hydrophobic region in forming infectious prion at the molecular level, we report X-ray crystal structures of mouse (Mo) prion protein (PrP) (residues 89-230) in complex with a nanobody (Nb484). Using the recombinant prion propagation system, we show that the binding of Nb484 to the hydrophobic region of MoPrP efficiently inhibits the propagation of proteinase K resistant PrPSc and prion infectivity. In addition, when added to cultured mouse brain slices in high concentrations, Nb484 exhibits no neurotoxicity, which is drastically different from other neurotoxic anti-PrP antibodies, suggesting that the Nb484 can be a potential therapeutic agent against prion disease. In summary, our data provides the first structure-function evidence supporting a crucial role of the hydrophobic region of PrP in forming an infectious prion.

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Primary Citation of related structures