6HDC image
Entry Detail
PDB ID:
6HDC
Title:
Crystal structure of the potassium channel MtTMEM175 T38A variant in complex with a Nanobody-MBP fusion protein
Biological Source:
PDB Version:
Deposition Date:
2018-08-17
Release Date:
2019-08-28
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.29
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 4 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nanobody,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein
Chain IDs:A
Chain Length:486
Number of Molecules:1
Biological Source:Lama glama, Escherichia coli (strain K12)
Polymer Type:polypeptide(L)
Description:TMEM175
Chain IDs:B
Chain Length:255
Number of Molecules:1
Biological Source:Marivirga tractuosa DSM 4126
Peptide-like Molecules
PRD_900001
Primary Citation
Structural basis for ion selectivity in TMEM175 K+channels.
Elife 9 ? ? (2020)
PMID: 32267231 DOI: 10.7554/eLife.53683

Abstact

The TMEM175 family constitutes recently discovered K+channels that are important for autophagosome turnover and lysosomal pH regulation and are associated with the early onset of Parkinson Disease. TMEM175 channels lack a P-loop selectivity filter, a hallmark of all known K+ channels, raising the question how selectivity is achieved. Here, we report the X-ray structure of a closed bacterial TMEM175 channel in complex with a nanobody fusion-protein disclosing bound K+ ions. Our analysis revealed that a highly conserved layer of threonine residues in the pore conveys a basal K+ selectivity. An additional layer comprising two serines in human TMEM175 increases selectivity further and renders this channel sensitive to 4-aminopyridine and Zn2+. Our findings suggest that large hydrophobic side chains occlude the pore, forming a physical gate, and that channel opening by iris-like motions simultaneously relocates the gate and exposes the otherwise concealed selectivity filter to the pore lumen.

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Primary Citation of related structures