6HD8 image
Deposition Date 2018-08-17
Release Date 2019-08-28
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6HD8
Title:
Crystal structure of the potassium channel MtTMEM175 in complex with a Nanobody-MBP fusion protein
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 4 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nanobody,Maltose/maltodextrin-binding periplasmic protein
Gene (Uniprot):malE
Chain IDs:A
Chain Length:486
Number of Molecules:1
Biological Source:Lama glama, Escherichia coli (strain K12)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TMEM175
Gene (Uniprot):Ftrac_2467
Chain IDs:B
Chain Length:255
Number of Molecules:1
Biological Source:Marivirga tractuosa DSM 4126
Peptide-like Molecules
PRD_900001
Primary Citation
Structural basis for ion selectivity in TMEM175 K+channels.
Elife 9 ? ? (2020)
PMID: 32267231 DOI: 10.7554/eLife.53683

Abstact

The TMEM175 family constitutes recently discovered K+channels that are important for autophagosome turnover and lysosomal pH regulation and are associated with the early onset of Parkinson Disease. TMEM175 channels lack a P-loop selectivity filter, a hallmark of all known K+ channels, raising the question how selectivity is achieved. Here, we report the X-ray structure of a closed bacterial TMEM175 channel in complex with a nanobody fusion-protein disclosing bound K+ ions. Our analysis revealed that a highly conserved layer of threonine residues in the pore conveys a basal K+ selectivity. An additional layer comprising two serines in human TMEM175 increases selectivity further and renders this channel sensitive to 4-aminopyridine and Zn2+. Our findings suggest that large hydrophobic side chains occlude the pore, forming a physical gate, and that channel opening by iris-like motions simultaneously relocates the gate and exposes the otherwise concealed selectivity filter to the pore lumen.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback