6HBJ image
Entry Detail
PDB ID:
6HBJ
EMDB ID:
Keywords:
Title:
Echovirus 18 empty particle
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2018-08-10
Release Date:
2019-03-20
Method Details:
Experimental Method:
Resolution:
3.16 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Viral protein 1
Chain IDs:A
Chain Length:287
Number of Molecules:1
Biological Source:Echovirus E18
Polymer Type:polypeptide(L)
Description:Viral protein 2
Chain IDs:B
Chain Length:260
Number of Molecules:1
Biological Source:Echovirus E18
Polymer Type:polypeptide(L)
Description:Viral protein 3
Chain IDs:C
Chain Length:239
Number of Molecules:1
Biological Source:Echovirus E18
Ligand Molecules
Primary Citation
Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun 10 1138 1138 (2019)
PMID: 30850609 DOI: 10.1038/s41467-019-09132-x

Abstact

Viruses from the genus Enterovirus are important human pathogens. Receptor binding or exposure to acidic pH in endosomes converts enterovirus particles to an activated state that is required for genome release. However, the mechanism of enterovirus uncoating is not well understood. Here, we use cryo-electron microscopy to visualize virions of human echovirus 18 in the process of genome release. We discover that the exit of the RNA from the particle of echovirus 18 results in a loss of one, two, or three adjacent capsid-protein pentamers. The opening in the capsid, which is more than 120 Å in diameter, enables the release of the genome without the need to unwind its putative double-stranded RNA segments. We also detect capsids lacking pentamers during genome release from echovirus 30. Thus, our findings uncover a mechanism of enterovirus genome release that could become target for antiviral drugs.

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Primary Citation of related structures