6H7J image
Entry Detail
PDB ID:
6H7J
Keywords:
Title:
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND AGONIST ISOPRENALINE AND NANOBODY Nb80
Biological Source:
PDB Version:
Deposition Date:
2018-07-31
Release Date:
2018-10-17
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.31
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-1 adrenergic receptor
Mutations:R68S,M90V,C116L,F327A,F338M,C358A
Chain IDs:B (auth: A), E (auth: B)
Chain Length:307
Number of Molecules:2
Biological Source:Meleagris gallopavo
Polymer Type:polypeptide(L)
Description:Camelid antibody fragment Nb80
Chain IDs:C, F (auth: D)
Chain Length:121
Number of Molecules:2
Biological Source:Lama glama
Polymer Type:polypeptide(L)
Description:Thioredoxin 1
Mutations:C32S,C35S
Chain IDs:A (auth: E), D (auth: F)
Chain Length:109
Number of Molecules:2
Biological Source:Escherichia coli (strain K12)
Primary Citation
Molecular basis for high-affinity agonist binding in GPCRs.
Science 364 775 778 (2019)
PMID: 31072904 DOI: 10.1126/science.aau5595

Abstact

G protein-coupled receptors (GPCRs) in the G protein-coupled active state have higher affinity for agonists as compared with when they are in the inactive state, but the molecular basis for this is unclear. We have determined four active-state structures of the β1-adrenoceptor (β1AR) bound to conformation-specific nanobodies in the presence of agonists of varying efficacy. Comparison with inactive-state structures of β1AR bound to the identical ligands showed a 24 to 42% reduction in the volume of the orthosteric binding site. Potential hydrogen bonds were also shorter, and there was up to a 30% increase in the number of atomic contacts between the receptor and ligand. This explains the increase in agonist affinity of GPCRs in the active state for a wide range of structurally distinct agonists.

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