6H6D image
Deposition Date 2018-07-27
Release Date 2019-08-14
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6H6D
Keywords:
IMMUNE SYSTEM
Title:
Crystal structures of the murine class I major histocompatibility complex H-2Db in complex with adenovirus-derived peptide Ad10
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
unidentified adenovirus (Taxon ID: 10535)
Host Organism:
Escherichia coli BL21
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.40 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
6H6D validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:H-2 class I histocompatibility antigen, D-B alpha chain
Gene (Uniprot):H2-D1
Chain IDs:A, D
Chain Length:338
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P01899 Pfam ID:PF00129, PF07654, PF06623
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2m
Chain IDs:B, E
Chain Length:99
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P01887 Pfam ID:PF07654
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Early E1A protein
Chain IDs:C, F
Chain Length:10
Number of Molecules:2
Biological Source:unidentified adenovirus
UniProt ID:P03255
Ligand Molecules
CL
GOL
SO4
Primary Citation
Crystal structures of H-2Db and H-2Dbm13 with cancer-associated Ad 10 peptide reveal that subtle changes in the peptide environment impact thermostability and alloreactivity
to be published ? ? ? (?)
Primary Citation of related structures
6H6D