6GZP image
Deposition Date 2018-07-04
Release Date 2018-07-18
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6GZP
Keywords:
Title:
Llama nanobody PorM_02 structure determined at room temperature by in-situ diffraction in ChipX microfluidic device
Biological Source:
Source Organism:
Lama glama (Taxon ID: 9844)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nanobody
Chain IDs:A
Chain Length:129
Number of Molecules:1
Biological Source:Lama glama
Primary Citation
A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography.
Iucrj 6 454 464 (2019)
PMID: 31098026 DOI: 10.1107/S2052252519003622

Abstact

Determining optimal conditions for the production of well diffracting crystals is a key step in every biocrystallography project. Here, a microfluidic device is described that enables the production of crystals by counter-diffusion and their direct on-chip analysis by serial crystallography at room temperature. Nine 'non-model' and diverse biomacromolecules, including seven soluble proteins, a membrane protein and an RNA duplex, were crystallized and treated on-chip with a variety of standard techniques including micro-seeding, crystal soaking with ligands and crystal detection by fluorescence. Furthermore, the crystal structures of four proteins and an RNA were determined based on serial data collected on four synchrotron beamlines, demonstrating the general applicability of this multipurpose chip concept.

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Primary Citation of related structures