6GXS image
Deposition Date 2018-06-27
Release Date 2019-12-04
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6GXS
Title:
Crystal structure of CV39L lectin from Chromobacterium violaceum at 1.8 A resolution
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CV39L lectin
Gene (Uniprot):CV_1052
Chain IDs:A, B, C, D
Chain Length:376
Number of Molecules:4
Biological Source:Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
Primary Citation
Characterization of novel lectins from Burkholderia pseudomallei and Chromobacterium violaceum with seven-bladed beta-propeller fold.
Int.J.Biol.Macromol. 152 1113 1124 (2020)
PMID: 31751748 DOI: 10.1016/j.ijbiomac.2019.10.200

Abstact

Burkholderia pseudomallei and Chromobacterium violaceum are bacteria of tropical and subtropical soil and water that occasionally cause fatal infections in humans and animals. Microbial lectins mediate the adhesion of organisms to host cells, which is the first phase in the development of infection. Here we report the discovery of two novel lectins from the above-mentioned bacteria - BP39L and CV39L. The crystal structures revealed that the lectins possess a seven-bladed β-propeller fold. Functional studies conducted on a series of oligo- and polysaccharides confirmed the preference of BP39L for mannosylated saccharides and CV39L for rather more complex polysaccharides with a monosaccharide preference for β-l-fucose. The presented data indicate that the proteins belong to a currently unknown family of lectins.

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