6GSZ image
Entry Detail
PDB ID:
6GSZ
Keywords:
Title:
Crystal structure of native alfa-L-rhamnosidase from Aspergillus terreus
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-06-15
Release Date:
2018-11-14
Method Details:
Experimental Method:
Resolution:
1.38 Å
R-Value Free:
0.16
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha-L-rhamnosidase
Chain IDs:A
Chain Length:870
Number of Molecules:1
Biological Source:Aspergillus terreus
Primary Citation
Crystal structure of native alpha-L-rhamnosidase from Aspergillus terreus.
Acta Crystallogr D Struct Biol 74 1078 1084 (2018)
PMID: 30387766 DOI: 10.1107/S2059798318013049

Abstact

α-L-Rhamnosidases cleave terminal nonreducing α-L-rhamnosyl residues from many natural rhamnoglycosides. This makes them catalysts of interest for various biotechnological applications. The X-ray structure of the GH78 family α-L-rhamnosidase from Aspergillus terreus has been determined at 1.38 Å resolution using the sulfur single-wavelength anomalous dispersion phasing method. The protein was isolated from its natural source in the native glycosylated form, and the active site contained a glucose molecule, probably from the growth medium. In addition to its catalytic domain, the α-L-rhamnosidase from A. terreus contains four accessory domains of unknown function. The structural data suggest that two of these accessory domains, E and F, might play a role in stabilizing the aglycon portion of the bound substrate.

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