6GMS image
Entry Detail
PDB ID:
6GMS
Keywords:
Title:
Solution NMR structure of the major type IV pilin PpdD from enterohemorrhagic Escherichia coli (EHEC)
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2018-05-28
Release Date:
2019-05-15
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Prepilin peptidase-dependent protein D
Chain IDs:A
Chain Length:132
Number of Molecules:1
Biological Source:Escherichia coli O157:H7
Ligand Molecules
Primary Citation
Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Structure 27 1082 1093.e5 (2019)
PMID: 31056419 DOI: 10.1016/j.str.2019.03.021

Abstact

Bacterial type 4a pili are dynamic surface filaments that promote bacterial adherence, motility, and macromolecular transport. Their genes are highly conserved among enterobacteria and their expression in enterohemorrhagic Escherichia coli (EHEC) promotes adhesion to intestinal epithelia and pro-inflammatory signaling. To define the molecular basis of EHEC pilus assembly, we determined the structure of the periplasmic domain of its major subunit PpdD (PpdDp), a prototype of an enterobacterial pilin subfamily containing two disulfide bonds. The structure of PpdDp, determined by NMR, was then docked into the density envelope of purified EHEC pili obtained by cryoelectron microscopy (cryo-EM). Cryo-EM reconstruction of EHEC pili at ∼8 Å resolution revealed extremely high pilus flexibility correlating with a large extended region of the pilin stem. Systematic mutagenesis combined with functional and interaction analyses identified charged residues essential for pilus assembly. Structural information on exposed regions and interfaces between EHEC pilins is relevant for vaccine and drug discovery.

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Primary Citation of related structures