6GIO image
Entry Detail
PDB ID:
6GIO
Keywords:
Title:
Structure of Amino Acid Amide Racemase from Ochrobactrum anthropi
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-05-14
Release Date:
2019-03-27
Method Details:
Experimental Method:
Resolution:
1.87 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Amino acid amide racemase
Chain IDs:A (auth: D), B (auth: A), C (auth: B), D (auth: C)
Chain Length:439
Number of Molecules:4
Biological Source:Ochrobactrum anthropi
Primary Citation
An Aminocaprolactam Racemase from Ochrobactrum anthropi with Promiscuous Amino Acid Ester Racemase Activity.
Chembiochem ? ? ? (2018)
PMID: 29897155 DOI: 10.1002/cbic.201800265

Abstact

The kinetic resolution of amino acid esters (AAEs) is a useful synthetic strategy for the preparation of single-enantiomer amino acids. The development of an enzymatic dynamic kinetic resolution (DKR) process for AAEs, which would give a theoretical yield of 100 % of the enantiopure product, would require an amino acid ester racemase (AAER); however, no such enzyme has been described. We have identified low AAER activity of 15 U mg-1 in a homologue of a PLP-dependent α-amino ϵ-caprolactam racemase (ACLR) from Ochrobactrum anthropi. We have determined the structure of this enzyme, OaACLR, to a resolution of 1.87 Å and, by using structure-guided saturation mutagenesis, in combination with a colorimetric screen for AAER activity, we have identified a mutant, L293C, in which the promiscuous AAER activity of this enzyme towards l-phenylalanine methyl ester is improved 3.7-fold.

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