6GED image
Deposition Date 2018-04-26
Release Date 2018-05-16
Last Version Date 2024-01-17
Entry Detail
PDB ID:
6GED
Keywords:
Title:
Adhesin domain of PrgB from Enterococcus faecalis bound to DNA
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PrgB
Gene (Uniprot):prgB
Chain IDs:A
Chain Length:315
Number of Molecules:1
Biological Source:Enterococcus faecalis
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*GP*GP*CP*GP*GP*CP*CP*CP*G)-3')
Chain IDs:B (auth: C)
Chain Length:10
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*GP*GP*GP*CP*CP*GP*CP*CP*C)-3')
Chain IDs:C (auth: D)
Chain Length:10
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction.
Mol. Microbiol. 109 291 305 (2018)
PMID: 29723434 DOI: 10.1111/mmi.13980

Abstact

Gram-positive bacteria deploy type IV secretion systems (T4SSs) to facilitate horizontal gene transfer. The T4SSs of Gram-positive bacteria rely on surface adhesins as opposed to conjugative pili to facilitate mating. Enterococcus faecalis PrgB is a surface adhesin that promotes mating pair formation and robust biofilm development in an extracellular DNA (eDNA) dependent manner. Here, we report the structure of the adhesin domain of PrgB. The adhesin domain binds and compacts DNA in vitro. In vivo PrgB deleted of its adhesin domain does not support cellular aggregation, biofilm development and conjugative DNA transfer. PrgB also binds lipoteichoic acid (LTA), which competes with DNA binding. We propose that PrgB binding and compaction of eDNA facilitates cell aggregation and plays an important role in establishment of early biofilms in mono- or polyspecies settings. Within these biofilms, PrgB mediates formation and stabilization of direct cell-cell contacts through alternative binding of cell-bound LTA, which in turn promotes establishment of productive mating junctions and efficient intra- or inter-species T4SS-mediated gene transfer.

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