6GBQ image
Deposition Date 2018-04-16
Release Date 2018-10-10
Last Version Date 2024-01-17
Entry Detail
PDB ID:
6GBQ
Keywords:
Title:
Crystal Structure of the oligomerization domain of Vp35 from Reston virus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.43 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polymerase cofactor VP35
Gene (Uniprot):VP35
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:71
Number of Molecules:8
Biological Source:Reston ebolavirus
Primary Citation
Structures of Ebola and Reston Virus VP35 Oligomerization Domains and Comparative Biophysical Characterization in All Ebolavirus Species.
Structure 27 39 54.e6 (2019)
PMID: 30482729 DOI: 10.1016/j.str.2018.09.009

Abstact

The multifunctional virion protein 35 (VP35) of ebolaviruses is a critical determinant of virulence and pathogenesis indispensable for viral replication and host innate immune evasion. Essential for VP35 function is homo-oligomerization via a coiled-coil motif. Here we report crystal structures of VP35 oligomerization domains from the prototypic Ebola virus (EBOV) and the non-pathogenic Reston virus (RESTV), together with a comparative biophysical characterization of the domains from all known species of the Ebolavirus genus. EBOV and RESTV VP35 oligomerization domains form bipartite parallel helix bundles with a canonical coiled coil in the N-terminal half and increased plasticity in the highly conserved C-terminal half. The domain assembles into trimers and tetramers in EBOV, whereas it exclusively forms tetramers in all other ebolavirus species. Substitution of coiled-coil leucine residues critical for immune antagonism leads to aberrant oligomerization. A conserved arginine involved in inter-chain salt bridges stabilizes the VP35 oligomerization domain and modulates between coiled-coil oligomeric states.

Legend

Protein

Chemical

Disease

Primary Citation of related structures