6GBP image
Entry Detail
PDB ID:
6GBP
Keywords:
Title:
Crystal Structure of the oligomerization domain of VP35 from Ebola virus, mercury derivative
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2018-04-16
Release Date:
2018-10-10
Method Details:
Experimental Method:
Resolution:
3.49 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Polymerase cofactor VP35
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:73
Number of Molecules:12
Biological Source:Zaire ebolavirus
Ligand Molecules
Primary Citation
Structures of Ebola and Reston Virus VP35 Oligomerization Domains and Comparative Biophysical Characterization in All Ebolavirus Species.
Structure 27 39 54.e6 (2019)
PMID: 30482729 DOI: 10.1016/j.str.2018.09.009

Abstact

The multifunctional virion protein 35 (VP35) of ebolaviruses is a critical determinant of virulence and pathogenesis indispensable for viral replication and host innate immune evasion. Essential for VP35 function is homo-oligomerization via a coiled-coil motif. Here we report crystal structures of VP35 oligomerization domains from the prototypic Ebola virus (EBOV) and the non-pathogenic Reston virus (RESTV), together with a comparative biophysical characterization of the domains from all known species of the Ebolavirus genus. EBOV and RESTV VP35 oligomerization domains form bipartite parallel helix bundles with a canonical coiled coil in the N-terminal half and increased plasticity in the highly conserved C-terminal half. The domain assembles into trimers and tetramers in EBOV, whereas it exclusively forms tetramers in all other ebolavirus species. Substitution of coiled-coil leucine residues critical for immune antagonism leads to aberrant oligomerization. A conserved arginine involved in inter-chain salt bridges stabilizes the VP35 oligomerization domain and modulates between coiled-coil oligomeric states.

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