ISDA

Deposition Date 2018-04-09

Release Date 2019-04-17

Last Version Date 2024-01-17

Entry Detail

PDB ID:

6G8P

Keywords:

ONCOPROTEIN

Title:

14-3-3sigma in complex with a P129beta3P and L132beta3L mutated YAP pS127 phosphopeptide

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.15

R-Value Work:

0.13

R-Value Observed:

0.13

Space Group:

C 2 2 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:14-3-3 protein sigma
Gene (Uniprot):SFN
Chain IDs:A
Chain Length:236
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P31947 Pfam ID:PF00244

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcriptional coactivator YAP1
Gene (Uniprot):YAP1
Chain IDs:B (auth: P)
Chain Length:11
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P46937

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
EOE	B	PRO	modified residue
SEP	B	SER	modified residue

Ligand Molecules

Primary Citation

A study on the effect of synthetic alpha-to-beta3-amino acid mutations on the binding of phosphopeptides to 14-3-3 proteins.

Andrei, S.A, Thijssen, V, Brunsveld, L, Ottmann, C, Milroy, L.G.Show

Chem.Commun.(Camb.) 55 14809 14812 (2019)

PMID: 31763628 DOI: 10.1039/c9cc07982c

Abstact

Here we describe the synthesis of a series of α,β-phosphopeptides, based on the phosphoepitope site on YAP1 (yes-associated protein 1), and the biochemical, biophysical and structural characterization of their binding to 14-3-3 proteins. The impact of systematic mono- and di-substitution of α → β3 amino acid residues around the phosphoserine residue are discussed. Our results confirm the important role played by the +2 proline residue in the thermodynamics and structure of the phosphoepitope/14-3-3 interaction.

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Primary Citation of related structures