ISDA: 6G2N

Deposition Date 2018-03-23

Release Date 2018-07-11

Last Version Date 2024-11-20

Entry Detail

PDB ID:

6G2N

Keywords:

HYDROLASE

Title:

Crystal structure of human cytosolic 5'(3')-deoxyribonucleotidase in complex with the inhibitor PB-PAU

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.40 Å

R-Value Free:

0.19

R-Value Work:

0.15

R-Value Observed:

0.15

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:5'(3')-deoxyribonucleotidase, cytosolic type
Gene (Uniprot):NT5C
Chain IDs:A, B
Chain Length:205
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q8TCD5 Pfam ID:PF06941

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
CME	A	CYS	modified residue

Ligand Molecules

O84

Primary Citation

Structure-based optimization of bisphosphonate nucleoside inhibitors of human 5'(3')-deoxyribonucleotidases

Pachl, P, Simak, O, Budesinsky, M, Brynda, J, Rosenberg, I, Rezacova, P.Show

Eur.J.Org.Chem. ? ? ? (2018)

DOI: 10.1002/ejoc.201800515

Primary Citation of related structures