ISDA: 6G2M

Deposition Date 2018-03-23

Release Date 2018-07-11

Last Version Date 2024-01-17

Entry Detail

PDB ID:

6G2M

Keywords:

HYDROLASE

Title:

Crystal structure of human mitochondrial 5'(3')-deoxyribonucleotidase in complex with the inhibitor PB-PAU

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.37 Å

R-Value Free:

0.15

R-Value Work:

0.12

R-Value Observed:

0.12

Space Group:

P 43 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:5'(3')-deoxyribonucleotidase, mitochondrial
Gene (Uniprot):NT5M
Chain IDs:A
Chain Length:202
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9NPB1 Pfam ID:PF06941

Ligand Molecules

BME

EDO

GOL

O84

Primary Citation

Structure-based optimization of bisphosphonate nucleoside inhibitors of human 5'(3')-deoxyribonucleotidases

Pachl, P, Simak, O, Budesinsky, M, Brynda, J, Rosenberg, I, Rezacova, P.Show

Eur.J.Org.Chem. ? ? ? (2018)

DOI: 10.1002/ejoc.201800515

Primary Citation of related structures