6FS4 image
Entry Detail
PDB ID:
6FS4
Title:
NMR structure of Casocidin-II antimicrobial peptide in 60% TFE
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2018-02-19
Release Date:
2018-10-03
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha-S2-casein
Chain IDs:A
Chain Length:31
Number of Molecules:1
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
The antimicrobial peptides casocidins I and II: Solution structural studies in water and different membrane-mimetic environments.
Peptides 114 50 58 (2019)
PMID: 30243923 DOI: 10.1016/j.peptides.2018.09.004

Abstact

Antimicrobial peptides (AMPs) represent crucial components of the natural immune defense machinery of different organisms. Generally, they are short and positively charged, and bind to and destabilize bacterial cytoplasmic membranes, ultimately leading to cell death. Natural proteolytic cleavage of αs2-casein in bovine milk generates the antimicrobial peptides casocidin I and II. In the current study, we report for the first time on a detailed structure characterization of casocidins in solution by means of Nuclear Magnetic Resonance spectroscopy (NMR). Structural studies were conducted in H2O and different membrane mimetic environments, including 2,2,2-trifluoroethanol (TFE) and lipid anionic and zwitterionic vesicles. For both peptides, results indicate a mainly disordered conformation in H2O, with a few residues in a partial helical structure. No wide increase of order occurs upon interaction with lipid vesicles. Conversely, peptide conformation becomes highly ordered in presence of TFE, with both casocidins presenting a large helical content. Our data point out a preference of casocidins to interact with model anionic membranes. These results are compatible with possible mechanisms of action underlying the antimicrobial activity of casocidins that ultimately may affect membrane bilayer stability.

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