6FPD image
Deposition Date 2018-02-09
Release Date 2018-05-16
Last Version Date 2024-05-08
Entry Detail
PDB ID:
6FPD
Title:
AB21 protein from Agaricus bisporus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.31
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein AB21
Chain IDs:A
Chain Length:208
Number of Molecules:1
Biological Source:Agaricus bisporus
Primary Citation
Structure and properties of AB21, a novel Agaricus bisporus protein with structural relation to bacterial pore-forming toxins.
Proteins 86 897 911 (2018)
PMID: 29722060 DOI: 10.1002/prot.25522

Abstact

We report the characterization of the dimeric protein AB21 from Agaricus bisporus, one of the most commonly and widely consumed mushrooms in the world. The protein shares no significant sequence similarity with any protein of known function, and it is the first characterized member of its protein family. The coding sequence of the ab21 gene was determined and the protein was expressed in E. coli in a recombinant form. We demonstrated a high thermal and pH stability of AB21 and proved the weak affinity of the protein to divalent ions of some transition metals (nickel, zinc, cadmium, and cobalt). The reported crystallographic structure exhibits an interesting rod-like helical bundle fold with structural similarity to bacterial toxins of the ClyA superfamily. By immunostaining, we demonstrated an abundance of AB21 in the fruiting bodies of A. bisporus.

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Primary Citation of related structures