6FOF image
Deposition Date 2018-02-07
Release Date 2018-07-18
Last Version Date 2024-01-17
Entry Detail
PDB ID:
6FOF
Title:
Crystal structure of a crystallized variant of h-Gal3: Gal-3[NTS/VII-IX]
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Galectin-3,Galectin-3
Gene (Uniprot):LGALS3
Chain IDs:A (auth: C), B (auth: D), C (auth: E), D (auth: G), E (auth: A), F (auth: B), G (auth: F), H, I, J, K, L
Chain Length:196
Number of Molecules:12
Biological Source:Homo sapiens
Ligand Molecules
Peptide-like Molecules
PRD_900004
Primary Citation
Crystallization of a human galectin-3 variant with two ordered segments in the shortened N-terminal tail.
Sci Rep 8 9835 9835 (2018)
PMID: 29959397 DOI: 10.1038/s41598-018-28235-x

Abstact

Among members of the family of adhesion/growth-regulatory galectins, galectin-3 (Gal-3) bears a unique modular architecture. A N-terminal tail (NT) consisting of the N-terminal segment (NTS) and nine collagen-like repeats is linked to the canonical lectin domain. In contrast to bivalent proto- and tandem-repeat-type galectins, Gal-3 is monomeric in solution, capable to self-associate in the presence of bi- to multivalent ligands, and the NTS is involved in cellular compartmentalization. Since no crystallographic information on Gal-3 beyond the lectin domain is available, we used a shortened variant with NTS and repeats VII-IX. This protein crystallized as tetramers with contacts between the lectin domains. The region from Tyr101 (in repeat IX) to Leu114 (in the CRD) formed a hairpin. The NTS extends the canonical β-sheet of F1-F5 strands with two new β-strands on the F face. Together, crystallographic and SAXS data reveal a mode of intramolecular structure building involving the highly flexible Gal-3's NT.

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Primary Citation of related structures