6FL5 image
Deposition Date 2018-01-25
Release Date 2018-10-10
Last Version Date 2024-01-17
Entry Detail
PDB ID:
6FL5
Keywords:
Title:
Structure of human SHMT1-H135N-R137A-E168N mutant at 3.6 Ang. resolution
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
3.60 Å
R-Value Free:
0.27
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serine hydroxymethyltransferase, cytosolic
Gene (Uniprot):SHMT1
Mutagens:H135N, R137A, E168N
Chain IDs:A, B (auth: D), C (auth: G), D (auth: J)
Chain Length:471
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
The catalytic activity of serine hydroxymethyltransferase is essential for de novo nuclear dTMP synthesis in lung cancer cells.
FEBS J. 285 3238 3253 (2018)
PMID: 30035852 DOI: 10.1111/febs.14610

Abstact

UNLABELLED Cancer cells reprogramme one-carbon metabolism (OCM) to sustain growth and proliferation. Depending on cell demands, serine hydroxymethyltransferase (SHMT) dynamically changes the fluxes of OCM by reversibly converting serine and tetrahydrofolate (THF) into 5,10-methylene-THF and glycine. SHMT is a tetrameric enzyme that mainly exists in three isoforms; two localize in the cytosol (SHMT1/SHMT2α) and one (SHMT2) in the mitochondria. Both the cytosolic isoforms can also translocate to the nucleus to sustain de novo thymidylate synthesis and support cell proliferation. Finally, the expression levels of the different isoforms are regulated to a certain extent by a yet unknown crosstalk mechanism. We have designed and fully characterized a set of three SHMT1 mutants, which uncouple the oligomeric state of the enzyme from its catalytic activity. We have then investigated the effects of the mutations on SHMT1 nuclear localization, cell viability and crosstalk in lung cancer cells (A549; H1299). Our data reveal that in these cell lines de novo thymidylate synthesis requires SHMT1 to be active, regardless of its oligomeric state. We have also confirmed that the crosstalk between the cytosolic and mitochondrial SHMT actually takes place and regulates the expression of the two isoforms. Apparently, the crosstalk mechanism is independent from the oligomeric state and the catalytic activity of SHMT1. DATABASE Structural data are available in the PDB under the accession number 6FL5.

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