6FI7 image
Deposition Date 2018-01-17
Release Date 2018-06-06
Last Version Date 2024-06-19
Entry Detail
PDB ID:
6FI7
Title:
E.coli Sigma factor S (RpoS) Region 4
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:RNA polymerase sigma factor RpoS
Gene (Uniprot):rpoS
Chain IDs:A
Chain Length:86
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
T7 phage factor required for managing RpoS inEscherichia coli.
Proc. Natl. Acad. Sci. U.S.A. 115 E5353 E5362 (2018)
PMID: 29789383 DOI: 10.1073/pnas.1800429115

Abstact

T7 development in Escherichia coli requires the inhibition of the housekeeping form of the bacterial RNA polymerase (RNAP), Eσ70, by two T7 proteins: Gp2 and Gp5.7. Although the biological role of Gp2 is well understood, that of Gp5.7 remains to be fully deciphered. Here, we present results from functional and structural analyses to reveal that Gp5.7 primarily serves to inhibit EσS, the predominant form of the RNAP in the stationary phase of growth, which accumulates in exponentially growing E. coli as a consequence of the buildup of guanosine pentaphosphate [(p)ppGpp] during T7 development. We further demonstrate a requirement of Gp5.7 for T7 development in E. coli cells in the stationary phase of growth. Our finding represents a paradigm for how some lytic phages have evolved distinct mechanisms to inhibit the bacterial transcription machinery to facilitate phage development in bacteria in the exponential and stationary phases of growth.

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Primary Citation of related structures