ISDA: 6FDI

Deposition Date 2017-12-24

Release Date 2019-04-10

Last Version Date 2024-01-17

Entry Detail

PDB ID:

6FDI

Keywords:

HYDROLASE

Title:

Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-226

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.19

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:cAMP-specific 3',5'-cyclic phosphodiesterase 4D
Gene (Uniprot):PDE4D
Chain IDs:A, B, C, D
Chain Length:364
Number of Molecules:4
Biological Source:Homo sapiens

UniProt ID:Q08499 Pfam ID:PF00233 EC:3.1.4.53

Ligand Molecules

D5T

EDO

EPE

PEG

PG4

Primary Citation

hPDE4D2 structure with inhibitor NPD-226

Salado, I.G, Moreno, C, Sakaine, G, Singh, A.K, Blaazer, A.R, Siderius, M, Matheeussen, A, Gul, S, Maes, L, Leurs, R, Brown, D.G, Augustyns, K.Show

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Primary Citation of related structures

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