6FAX image
Deposition Date 2017-12-18
Release Date 2018-02-07
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6FAX
Keywords:
Title:
Complex of Human CD40 Ectodomain with Lob 7.4 Fab
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.99 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lob 7.4 heavy chain
Chain IDs:B (auth: H)
Chain Length:240
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Lob 7.4 light chain
Chain IDs:A (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tumor necrosis factor receptor superfamily member 5
Gene (Uniprot):CD40
Chain IDs:C (auth: R)
Chain Length:173
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Complex Interplay between Epitope Specificity and Isotype Dictates the Biological Activity of Anti-human CD40 Antibodies.
Cancer Cell 33 664 675.e4 (2018)
PMID: 29576376 DOI: 10.1016/j.ccell.2018.02.009

Abstact

Anti-CD40 monoclonal antibodies (mAbs) that promote or inhibit receptor function hold promise as therapeutics for cancer and autoimmunity. Rules governing their diverse range of functions, however, are lacking. Here we determined characteristics of nine hCD40 mAbs engaging epitopes throughout the CD40 extracellular region expressed as varying isotypes. All mAb formats were strong agonists when hyper-crosslinked; however, only those binding the membrane-distal cysteine-rich domain 1 (CRD1) retained agonistic activity with physiological Fc gamma receptor crosslinking or as human immunoglobulin G2 isotype; agonistic activity decreased as epitopes drew closer to the membrane. In addition, all CRD2-4 binding mAbs blocked CD40 ligand interaction and were potent antagonists. Thus, the membrane distal CRD1 provides a region of choice for selecting CD40 agonists while CRD2-4 provides antagonistic epitopes.

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Primary Citation of related structures