6FAH image
Entry Detail
PDB ID:
6FAH
Keywords:
Title:
Molecular basis of the flavin-based electron-bifurcating caffeyl-CoA reductase reaction
Biological Source:
PDB Version:
Deposition Date:
2017-12-15
Release Date:
2018-01-24
Method Details:
Experimental Method:
Resolution:
3.13 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Caffeyl-CoA reductase-Etf complex subunit CarE
Chain IDs:A, E
Chain Length:396
Number of Molecules:2
Biological Source:Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)
Polymer Type:polypeptide(L)
Description:Caffeyl-CoA reductase-Etf complex subunit CarD
Chain IDs:B, F
Chain Length:262
Number of Molecules:2
Biological Source:Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)
Polymer Type:polypeptide(L)
Description:Caffeyl-CoA reductase-Etf complex subunit CarC
Chain IDs:C, D
Chain Length:379
Number of Molecules:2
Biological Source:Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)
Primary Citation
Molecular basis of the flavin-based electron-bifurcating caffeyl-CoA reductase reaction.
FEBS Lett. 592 332 342 (2018)
PMID: 29325219 DOI: 10.1002/1873-3468.12971

Abstact

Flavin-based electron bifurcation (FBEB) is a recently discovered mode of energy coupling in anaerobic microorganisms. The electron-bifurcating caffeyl-CoA reductase (CarCDE) catalyzes the reduction of caffeyl-CoA and ferredoxin by oxidizing NADH. The 3.5 Å structure of the heterododecameric Car(CDE)4 complex of Acetobacterium woodii, presented here, reveals compared to other electron-transferring flavoprotein/acyl dehydrogenase family members an additional ferredoxin-like domain with two [4Fe-4S] clusters N-terminally fused to CarE. It might serve, in vivo, as specific adaptor for the physiological electron acceptor. Kinetic analysis of a CarCDE(∆Fd) complex indicates the bypassing of the ferredoxin-like domain by artificial electron acceptors. Site-directed mutagenesis studies substantiated the crucial role of the C-terminal arm of CarD and of ArgE203, hydrogen-bonded to the bifurcating FAD, for FBEB.

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