6F9Q image
Deposition Date 2017-12-15
Release Date 2018-12-12
Last Version Date 2024-01-17
Entry Detail
PDB ID:
6F9Q
Title:
Binary complex of a 7S-cis-cis-nepetalactol cyclase from Nepeta mussinii with NAD+
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.40 Å
R-Value Free:
0.16
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:7S-cis-cis-nepetalactol cyclase
Chain IDs:A, B, C, D
Chain Length:272
Number of Molecules:4
Biological Source:Nepeta racemosa
Primary Citation
Uncoupled activation and cyclization in catmint reductive terpenoid biosynthesis.
Nat. Chem. Biol. 15 71 79 (2019)
PMID: 30531909 DOI: 10.1038/s41589-018-0185-2

Abstact

Terpene synthases typically form complex molecular scaffolds by concerted activation and cyclization of linear starting materials in a single enzyme active site. Here we show that iridoid synthase, an atypical reductive terpene synthase, catalyzes the activation of its substrate 8-oxogeranial into a reactive enol intermediate, but does not catalyze the subsequent cyclization into nepetalactol. This discovery led us to identify a class of nepetalactol-related short-chain dehydrogenase enzymes (NEPS) from catmint (Nepeta mussinii) that capture this reactive intermediate and catalyze the stereoselective cyclisation into distinct nepetalactol stereoisomers. Subsequent oxidation of nepetalactols by NEPS1 provides nepetalactones, metabolites that are well known for both insect-repellent activity and euphoric effects in cats. Structural characterization of the NEPS3 cyclase reveals that it binds to NAD+ yet does not utilize it chemically for a non-oxidoreductive formal [4 + 2] cyclization. These discoveries will complement metabolic reconstructions of iridoid and monoterpene indole alkaloid biosynthesis.

Legend

Protein

Chemical

Disease

Primary Citation of related structures