6F3F image
Entry Detail
PDB ID:
6F3F
Title:
Autoinhibited Src kinase bound to ADP
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-11-28
Release Date:
2017-12-27
Method Details:
Experimental Method:
Resolution:
2.42 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Tyrosine-protein kinase
Chain IDs:A
Chain Length:455
Number of Molecules:1
Biological Source:Mus musculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PTR A TYR modified residue
Primary Citation
A switch in nucleotide affinity governs activation of the Src and Tec family kinases.
Sci Rep 7 17405 17405 (2017)
PMID: 29234112 DOI: 10.1038/s41598-017-17703-5

Abstact

The Tec kinases, closely related to Src family kinases, are essential for lymphocyte function in the adaptive immune system. Whilst the Src and Abl kinases are regulated by tail phosphorylation and N-terminal myristoylation respectively, the Tec kinases are notable for the absence of either regulatory element. We have found that the inactive conformations of the Tec kinase Itk and Src preferentially bind ADP over ATP, stabilising both proteins. We demonstrate that Itk adopts the same conformation as Src and that the autoinhibited conformation of Src is independent of its C-terminal tail. Allosteric activation of both Itk and Src depends critically on the disruption of a conserved hydrophobic stack that accompanies regulatory domain displacement. We show that a conformational switch permits the exchange of ADP for ATP, leading to efficient autophosphorylation and full activation. In summary, we propose a universal mechanism for the activation and autoinhibition of the Src and Tec kinases.

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Primary Citation of related structures