6F2R image
Deposition Date 2017-11-27
Release Date 2018-07-25
Last Version Date 2024-01-17
Entry Detail
PDB ID:
6F2R
Keywords:
Title:
A heterotetramer of human HspB2 and HspB3
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
R-Value Free:
0.31
R-Value Work:
0.29
R-Value Observed:
0.29
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Unknown peptide from HspB2 or HspB3
Chain IDs:P (auth: 1), Q (auth: 2), R (auth: 3)
Chain Length:5
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:HspB2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2
Gene (Uniprot):HSPB2
Chain IDs:A, D (auth: E), G (auth: I)
Chain Length:213
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:HspB2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2
Gene (Uniprot):HSPB2
Chain IDs:B (auth: C), F (auth: G), I (auth: K)
Chain Length:203
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Heat shock protein beta-2
Gene (Uniprot):HSPB2
Chain IDs:C (auth: D), N (auth: F), O (auth: J)
Chain Length:182
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Unknown peptide from HspB2 or HspB3
Chain IDs:J (auth: M)
Chain Length:10
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Unknown peptide from HspB2 or HspB3
Chain IDs:K (auth: N)
Chain Length:7
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Unknown peptide from HspB2 or HspB3
Chain IDs:L (auth: O)
Chain Length:6
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-2
Gene (Uniprot):HSPB3
Chain IDs:E (auth: T), H (auth: V), M (auth: Q)
Chain Length:161
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Unknown peptide from HspB2 or HspB3
Chain IDs:S (auth: W), T (auth: X), U (auth: Y)
Chain Length:12
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Terminal Regions Confer Plasticity to the Tetrameric Assembly of Human HspB2 and HspB3.
J.Mol.Biol. 430 3297 3310 (2018)
PMID: 29969581 DOI: 10.1016/j.jmb.2018.06.047

Abstact

Heterogeneity in small heat shock proteins (sHsps) spans multiple spatiotemporal regimes-from fast fluctuations of part of the protein, to conformational variability of tertiary structure, plasticity of the interfaces, and polydispersity of the inter-converting, and co-assembling oligomers. This heterogeneity and dynamic nature of sHsps has significantly hindered their structural characterization. Atomic coordinates are particularly lacking for vertebrate sHsps, where most available structures are of extensively truncated homomers. sHsps play important roles in maintaining protein levels in the cell and therefore in organismal health and disease. HspB2 and HspB3 are vertebrate sHsps that are found co-assembled in neuromuscular cells, and variants thereof are associated with disease. Here, we present the structure of human HspB2/B3, which crystallized as a hetero-tetramer in a 3:1 ratio. In the HspB2/B3 tetramer, the four α-crystallin domains (ACDs) assemble into a flattened tetrahedron which is pierced by two non-intersecting approximate dyads. Assembly is mediated by flexible "nuts and bolts" involving IXI/V motifs from terminal regions filling ACD pockets. Parts of the N-terminal region bind in an unfolded conformation into the anti-parallel shared ACD dimer grooves. Tracts of the terminal regions are not resolved, most likely due to their disorder in the crystal lattice. This first structure of a full-length human sHsp heteromer reveals the heterogeneous interactions of the terminal regions and suggests a plasticity that is important for the cytoprotective functions of sHsps.

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