6F2H image
Deposition Date 2017-11-24
Release Date 2018-10-03
Last Version Date 2024-05-08
Entry Detail
PDB ID:
6F2H
Keywords:
Title:
Structure of Protease 1 from Pyrococcus horikoshii co-crystallized in presence of 10 mM Tb-Xo4 and potassium iodide.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.19 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Deglycase PH1704
Gene (Uniprot):PH1704
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:166
Number of Molecules:12
Biological Source:Pyrococcus horikoshii
Primary Citation
Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry 24 9739 9746 (2018)
PMID: 29806881 DOI: 10.1002/chem.201802172

Abstact

Crystallophores are lanthanide complexes that act as powerful auxiliary for protein crystallography due to their strong nucleating and phasing effects. To get first insights on the mechanisms behind nucleation induced by Crystallophore, we systematically identified various elaborated networks of supramolecular interactions between Tb-Xo4 and subset of 6 protein structures determined by X-ray diffraction in complex with terbium-Crystallophore (Tb-Xo4). Such interaction mapping analyses demonstrate the versatile binding behavior of the Crystallophore and pave the way to a better understanding of its unique properties.

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Primary Citation of related structures