6F0L image
Deposition Date 2017-11-20
Release Date 2017-12-06
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6F0L
Keywords:
Title:
S. cerevisiae MCM double hexamer bound to duplex DNA
Biological Source:
Method Details:
Experimental Method:
Resolution:
4.77 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM2
Gene (Uniprot):MCM2
Chain IDs:A (auth: 2), G (auth: A)
Chain Length:868
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM3
Gene (Uniprot):MCM3
Chain IDs:B (auth: 3), H (auth: B)
Chain Length:971
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM4
Gene (Uniprot):MCM4
Chain IDs:C (auth: 4), I (auth: C)
Chain Length:933
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Polymer Type:polypeptide(L)
Molecule:Minichromosome maintenance protein 5
Gene (Uniprot):MCM5
Chain IDs:D (auth: 5), J (auth: D)
Chain Length:775
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM6
Gene (Uniprot):MCM6
Chain IDs:E (auth: 6), K (auth: E)
Chain Length:1017
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM7
Gene (Uniprot):MCM7
Chain IDs:F (auth: 7), L (auth: F)
Chain Length:845
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (62-MER)
Chain IDs:M (auth: X)
Chain Length:62
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (62-MER)
Chain IDs:N (auth: Y)
Chain Length:62
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Cryo-EM structure of a licensed DNA replication origin.
Nat Commun 8 2241 2241 (2017)
PMID: 29269875 DOI: 10.1038/s41467-017-02389-0

Abstact

Eukaryotic origins of replication are licensed upon loading of the MCM helicase motor onto DNA. ATP hydrolysis by MCM is required for loading and the post-catalytic MCM is an inactive double hexamer that encircles duplex DNA. Origin firing depends on MCM engagement of Cdc45 and GINS to form the CMG holo-helicase. CMG assembly requires several steps including MCM phosphorylation by DDK. To understand origin activation, here we have determined the cryo-EM structures of DNA-bound MCM, either unmodified or phosphorylated, and visualize a phospho-dependent MCM element likely important for Cdc45 recruitment. MCM pore loops touch both the Watson and Crick strands, constraining duplex DNA in a bent configuration. By comparing our new MCM-DNA structure with the structure of CMG-DNA, we suggest how the conformational transition from the loaded, post-catalytic MCM to CMG might promote DNA untwisting and melting at the onset of replication.

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Primary Citation of related structures