6ETQ image
Entry Detail
PDB ID:
6ETQ
Keywords:
Title:
Atomic resolution structure of RNase A (data collection 7)
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2017-10-27
Release Date:
2018-02-21
Method Details:
Experimental Method:
Resolution:
1.08 Å
R-Value Free:
0.21
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ribonuclease pancreatic
Chain IDs:A
Chain Length:124
Number of Molecules:1
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
Raman-markers of X-ray radiation damage of proteins.
Int. J. Biol. Macromol. 111 1194 1205 (2018)
PMID: 29374529 DOI: 10.1016/j.ijbiomac.2018.01.135

Abstact

Despite their high relevance, the mechanisms of X-ray radiation damage on protein structure yet have to be completely established. Here, we used Raman microspectrophotometry to follow X-ray-induced chemical modifications on the structure of the model protein bovine pancreatic ribonuclease (RNase A). The combination of dose-dependent Raman spectra and ultrahigh resolution (eight structures solved using data collected between 0.85 and 1.17 Å resolution on the same single crystal) allowed direct observation of several radiation damage events, including covalent bond breakages and formation of radicals. Our results are relevant for analytical photodamage detection and provide implications for a detailed understanding of the mechanisms of photoproduct formation.

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Primary Citation of related structures