6EOG image
Deposition Date 2017-10-09
Release Date 2018-08-22
Last Version Date 2024-05-08
Entry Detail
PDB ID:
6EOG
Title:
Human galectin-3c in complex with a galactose derivative
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.20 Å
R-Value Free:
0.14
R-Value Work:
0.11
R-Value Observed:
0.11
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Galectin-3
Gene (Uniprot):LGALS3
Chain IDs:A
Chain Length:138
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Monosaccharide Derivatives with Low-Nanomolar Lectin Affinity and High Selectivity Based on Combined Fluorine-Amide, Phenyl-Arginine, Sulfur-pi , and Halogen Bond Interactions.
ChemMedChem 13 133 137 (2018)
PMID: 29194992 DOI: 10.1002/cmdc.201700744

Abstact

The design of small and high-affinity lectin inhibitors remains a major challenge because the natural ligand binding sites of lectin are often shallow and have polar character. Herein we report that derivatizing galactose with un-natural structural elements that form multiple non-natural lectin-ligand interactions (orthogonal multipolar fluorine-amide, phenyl-arginine, sulfur-π, and halogen bond) can provide inhibitors with extraordinary affinity (low nanomolar) for the model lectin, galectin-3, which is more than five orders of magnitude higher than the parent galactose; moreover, is selective over other galectins.

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Primary Citation of related structures