6EHR image
Deposition Date 2017-09-14
Release Date 2017-10-04
Last Version Date 2024-05-08
Entry Detail
PDB ID:
6EHR
Title:
The crystal structure of the human LAMTOR-RagA CTD-RagC CTD complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ragulator complex protein LAMTOR3
Gene (Uniprot):LAMTOR3
Chain IDs:A
Chain Length:127
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ragulator complex protein LAMTOR2
Gene (Uniprot):LAMTOR2
Chain IDs:B
Chain Length:126
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ragulator complex protein LAMTOR5
Gene (Uniprot):LAMTOR5
Chain IDs:C
Chain Length:91
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ragulator complex protein LAMTOR4
Gene (Uniprot):LAMTOR4
Chain IDs:D
Chain Length:99
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ragulator complex protein LAMTOR1
Gene (Uniprot):LAMTOR1
Chain IDs:E
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ras-related GTP-binding protein A
Gene (Uniprot):RRAGA
Chain IDs:F
Chain Length:132
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ras-related GTP-binding protein C
Gene (Uniprot):RRAGC
Chain IDs:G
Chain Length:163
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystal structure of the human lysosomal mTORC1 scaffold complex and its impact on signaling.
Science 358 377 381 (2017)
PMID: 28935770 DOI: 10.1126/science.aao1583

Abstact

The LAMTOR [late endosomal and lysosomal adaptor and MAPK (mitogen-activated protein kinase) and mTOR (mechanistic target of rapamycin) activator] complex, also known as "Ragulator," controls the activity of mTOR complex 1 (mTORC1) on the lysosome. The crystal structure of LAMTOR consists of two roadblock/LC7 domain-folded heterodimers wrapped and apparently held together by LAMTOR1, which assembles the complex on lysosomes. In addition, the Rag guanosine triphosphatases (GTPases) associated with the pentamer through their carboxyl-terminal domains, predefining the orientation for interaction with mTORC1. In vitro reconstitution and experiments with site-directed mutagenesis defined the physiological importance of LAMTOR1 in assembling the remaining components to ensure fidelity of mTORC1 signaling. Functional data validated the effect of two short LAMTOR1 amino acid regions in recruitment and stabilization of the Rag GTPases.

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Primary Citation of related structures