6EDZ image
Deposition Date 2018-08-12
Release Date 2019-08-14
Last Version Date 2025-04-02
Entry Detail
PDB ID:
6EDZ
Keywords:
Title:
Crystal structure of Mycobacterium tuberculosis ICL2 in complex with acetyl-CoA, form I
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.67 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Isocitrate lyase 2
Gene (Uniprot):icl2
Chain IDs:A, B, C, D
Chain Length:786
Number of Molecules:4
Biological Source:Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSX A CYS modified residue
Ligand Molecules
Primary Citation
Acetyl-CoA-mediated activation of Mycobacterium tuberculosis isocitrate lyase 2.
Nat Commun 10 4639 4639 (2019)
PMID: 31604954 DOI: 10.1038/s41467-019-12614-7

Abstact

Isocitrate lyase is important for lipid utilisation by Mycobacterium tuberculosis but its ICL2 isoform is poorly understood. Here we report that binding of the lipid metabolites acetyl-CoA or propionyl-CoA to ICL2 induces a striking structural rearrangement, substantially increasing isocitrate lyase and methylisocitrate lyase activities. Thus, ICL2 plays a pivotal role regulating carbon flux between the tricarboxylic acid (TCA) cycle, glyoxylate shunt and methylcitrate cycle at high lipid concentrations, a mechanism essential for bacterial growth and virulence.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
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