6ECU image
Deposition Date 2018-08-08
Release Date 2018-12-12
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6ECU
Keywords:
Title:
SeMet substituted StiD O-MT residues 976-1266
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.96 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:StiD protein
Gene (Uniprot):stiD
Chain IDs:A, B
Chain Length:316
Number of Molecules:2
Biological Source:Stigmatella aurantiaca
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Structural Basis of Polyketide Synthase O-Methylation.
ACS Chem. Biol. 13 3221 3228 (2018)
PMID: 30489068 DOI: 10.1021/acschembio.8b00687

Abstact

Modular type I polyketide synthases (PKSs) produce some of the most chemically complex metabolites in nature through a series of multienzyme modules. Each module contains a variety of catalytic domains to selectively tailor the growing molecule. PKS O-methyltransferases (O-MTs) are predicted to methylate β-hydroxyl or β-keto groups, but their activity and structure have not been reported. We determined the domain boundaries and characterized the catalytic activity and structure of the StiD and StiE O-MTs, which methylate opposite β-hydroxyl stereocenters in the myxobacterial stigmatellin biosynthetic pathway. Substrate stereospecificity was demonstrated for the StiD O-MT. Key catalytic residues were identified in the crystal structures and investigated in StiE O-MT via site-directed mutagenesis and further validated with the cyanobacterial CurL O-MT from the curacin biosynthetic pathway. Initial structural and biochemical analysis of PKS O-MTs supplies a new chemoenzymatic tool, with the unique ability to selectively modify hydroxyl groups during polyketide biosynthesis.

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Chemical

Disease

Primary Citation of related structures
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