6EBX image
Deposition Date 1991-05-31
Release Date 1993-01-15
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6EBX
Keywords:
Title:
STRUCTURE DETERMINATION OF A DIMERIC FORM OF ERABUTOXIN B, CRYSTALLIZED FROM THIOCYANATE SOLUTION
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Work:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ERABUTOXIN B
Chain IDs:A, B
Chain Length:62
Number of Molecules:2
Biological Source:Laticauda semifasciata
Ligand Molecules
Primary Citation
Structure determination of a dimeric form of erabutoxin-b, crystallized from a thiocyanate solution.
Acta Crystallogr.,Sect.B 48 520 531 (1992)
PMID: 1418823 DOI: 10.1107/S010876819200096X

Abstact

Erabutoxin-b, M(r) = 6861.1, a single 62 amino-acid chain folded by four disulfide bridges, was crystallized in a new orthorhombic form by using thiocyanate as crystallizing agent. The space group is P2(1)2(1)2(1) with a = 53.36 (4), b = 40.89 (4), c = 55.71 (5) A, V = 121533.1 A and Z = 8. X-ray diffraction data were recorded at the LURE synchrotron facility (lambda = 1.405 A). The structure was solved by molecular replacement and shows a dimeric association through an anti-parallel beta-sheet around the twofold non-crystallographic axis. The two independent molecules, one SCN- ion and 97 associated water molecules were refined by molecular dynamics and annealing techniques to R = 19.6% (10,913 Fobs, resolution 5-1.7 A). The thiocyanate ion is located at the interface of the dimer and close to the non-crystallographic twofold axis.

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Primary Citation of related structures
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