6EBK image
Entry Detail
PDB ID:
6EBK
EMDB ID:
Title:
The voltage-activated Kv1.2-2.1 paddle chimera channel in lipid nanodiscs
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-08-06
Release Date:
2018-08-22
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Voltage-gated potassium channel subunit beta-2
Mutations:cytosolic domain (UNP residues 37-367)
Chain IDs:A, C, E, G
Chain Length:333
Number of Molecules:4
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Description:Potassium voltage-gated channel subfamily A member 2,Potassium voltage-gated channel subfamily B member 2 chimera
Chain IDs:B, D, F, H
Chain Length:513
Number of Molecules:4
Biological Source:Rattus norvegicus
Ligand Molecules
Primary Citation
Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs.
Elife 7 ? ? (2018)
PMID: 30109985 DOI: 10.7554/eLife.37558

Abstact

Voltage-activated potassium (Kv) channels open to conduct K+ ions in response to membrane depolarization, and subsequently enter non-conducting states through distinct mechanisms of inactivation. X-ray structures of detergent-solubilized Kv channels appear to have captured an open state even though a non-conducting C-type inactivated state would predominate in membranes in the absence of a transmembrane voltage. However, structures for a voltage-activated ion channel in a lipid bilayer environment have not yet been reported. Here we report the structure of the Kv1.2-2.1 paddle chimera channel reconstituted into lipid nanodiscs using single-particle cryo-electron microscopy. At a resolution of ~3 Å for the cytosolic domain and ~4 Å for the transmembrane domain, the structure determined in nanodiscs is similar to the previously determined X-ray structure. Our findings show that large differences in structure between detergent and lipid bilayer environments are unlikely, and enable us to propose possible structural mechanisms for C-type inactivation.

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Primary Citation of related structures