ISDA

Deposition Date 2018-07-03

Release Date 2019-07-10

Last Version Date 2024-10-30

Entry Detail

PDB ID:

6DZG

Keywords:

TRANSFERASE

Title:

Crystal structure of polyphosphate kinase 2 class I (SMc02148) in complex with ADP

Biological Source:

Source Organism:

Rhizobium meliloti (strain 1021) (Taxon ID: 266834)

Host Organism:

Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.87 Å

R-Value Free:

0.22

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Polyphosphate:ADP phosphotransferase 1
Gene (Uniprot):SMc02148
Chain IDs:A, B, C, D
Chain Length:300
Number of Molecules:4
Biological Source:Rhizobium meliloti (strain 1021)

UniProt ID:Q92SA6 Pfam ID:PF03976 EC:2.7.4.1

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
MSE	A	MET	modified residue

Ligand Molecules

ADP

AMP

MLT

Primary Citation

Structural insights into substrate selectivity and activity of bacterial polyphosphate kinases

Nocek, B, Joachimiak, A, Yakunin, A, Ruszkowski, M.Show

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Primary Citation of related structures