6DZ1 image
Deposition Date 2018-07-02
Release Date 2018-11-14
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6DZ1
Title:
Studies of Ion Transport in K+ Channels
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.26 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Potassium channel protein
Chain IDs:A, B
Chain Length:95
Number of Molecules:2
Biological Source:Bacillus cereus BDRD-Cer4
Primary Citation
Anomalous X-ray diffraction studies of ion transport in K+channels.
Nat Commun 9 4540 4540 (2018)
PMID: 30382100 DOI: 10.1038/s41467-018-06957-w

Abstact

Potassium ion channels utilize a highly selective filter to rapidly transport K+ ions across cellular membranes. This selectivity filter is composed of four binding sites which display almost equal electron density in crystal structures with high potassium ion concentrations. This electron density can be interpreted to reflect a superposition of alternating potassium ion and water occupied states or as adjacent potassium ions. Here, we use single wavelength anomalous dispersion (SAD) X-ray diffraction data collected near the potassium absorption edge to show experimentally that all ion binding sites within the selectivity filter are fully occupied by K+ ions. These data support the hypothesis that potassium ion transport occurs by direct Coulomb knock-on, and provide an example of solving the phase problem by K-SAD.

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Primary Citation of related structures