6DUP image
Deposition Date 2018-06-21
Release Date 2018-08-29
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6DUP
Keywords:
Title:
CRYSTAL STRUCTURE OF PXR IN COMPLEX WITH COMPOUND 7
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.26
R-Value Work:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nuclear receptor subfamily 1 group I member 2
Gene (Uniprot):NR1I2
Chain IDs:A, B
Chain Length:344
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Amelioration of PXR-mediated CYP3A4 induction by mGluR2 modulators.
Bioorg. Med. Chem. Lett. 28 3194 3196 (2018)
PMID: 30146095 DOI: 10.1016/j.bmcl.2018.08.022

Abstact

This work describes the rational amelioration of Cytochrome P450 4/5 (CYP3A4/5) induction through the Pregnane-X Receptor (PXR) pathway in a series of compounds that modulate the metabotropic glutamate Receptor 2 (mGluR2) via an allosteric mechanism. The compounds were initially shown to induce CYP3A4/5 via the gold-standard induction assay measured in primary human hepatocytes. This was followed up by testing the compounds in a PXR assay which correlated well with the assay in primary cells. Further, one of the compounds was crystallized with PXR (pdb code 6DUP). Analysis of this co-crystal structure, together with previously published PXR co-crystal structures, lead to modification ideas. The compounds synthesized based on these ideas were shown not to be CYP3A4/5 inducers. The mGluR2 activity of the resulting compounds was maintained.

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Primary Citation of related structures