ISDA

Deposition Date 2018-06-10

Release Date 2019-05-01

Last Version Date 2024-05-22

Entry Detail

PDB ID:

6DQ3

Keywords:

HYDROLASE

Title:

Streptococcus pyogenes deacetylase PplD in complex with acetate

Biological Source:

Source Organism:

Streptococcus pyogenes (Taxon ID: 1314)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.78 Å

R-Value Free:

0.21

R-Value Work:

0.17

R-Value Observed:

0.18

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:Polysaccharide deacetylase
Chain IDs:A, B
Chain Length:230
Number of Molecules:2
Biological Source:Streptococcus pyogenes

Ligand Molecules

ACT

EDO

IMD

Primary Citation

PplD is a de-N-acetylase of the cell wall linkage unit of streptococcal rhamnopolysaccharides

Rush, J.S, Parajuli, P, Ruda, A, Li, J, Pohane, A.A, Zamakhaeva, S, Rahman, M.M, Chang, J.C, Gogos, A, Kenner, C.W, Lambeau, G, Federle, M.J, Korotkov, K.V, Widmalm, G, Korotkova, N.Show

Nat Commun 13 590 ? (2022)

DOI: 10.1038/s41467-022-28257-0

Primary Citation of related structures