6DNO image
Deposition Date 2018-06-07
Release Date 2019-01-23
Last Version Date 2023-11-15
Entry Detail
PDB ID:
6DNO
Title:
Crystal structure of Protein Phosphatase 1 (PP1) bound to the muscle glycogen-targeting subunit (Gm)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
Gene (Uniprot):PPP1CA
Chain IDs:A
Chain Length:299
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Protein phosphatase 1 regulatory subunit 3A
Gene (Uniprot):PPP1R3A
Chain IDs:B
Chain Length:30
Number of Molecules:1
Biological Source:Oryctolagus cuniculus
Polymer Type:polypeptide(L)
Molecule:Microcystin-LR
Chain IDs:C
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct
Peptide-like Molecules
PRD_000212
Primary Citation
Identification of the substrate recruitment mechanism of the muscle glycogen protein phosphatase 1 holoenzyme.
Sci Adv 4 eaau6044 eaau6044 (2018)
PMID: 30443599 DOI: 10.1126/sciadv.aau6044

Abstact

Glycogen is the primary storage form of glucose. Glycogen synthesis and breakdown are tightly controlled by glycogen synthase (GYS) and phosphorylase, respectively. The enzyme responsible for dephosphorylating GYS and phosphorylase, which results in their activation (GYS) or inactivation (phosphorylase) to robustly stimulate glycogen synthesis, is protein phosphatase 1 (PP1). However, our understanding of how PP1 recruits these substrates is limited. Here, we show how PP1, together with its muscle glycogen-targeting (GM) regulatory subunit, recruits and selectively dephosphorylates its substrates. Our molecular data reveal that the GM carbohydrate binding module (GM CBM21), which is amino-terminal to the GM PP1 binding domain, has a dual function in directing PP1 substrate specificity: It either directly recruits substrates (i.e., GYS) or recruits them indirectly by localization (via glycogen for phosphorylase). Our data provide the molecular basis for PP1 regulation by GM and reveal how PP1-mediated dephosphorylation is driven by scaffolding-based substrate recruitment.

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Primary Citation of related structures